Package index
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ModulePlot() - module plot
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ReadCellBender_h5() - Load CellBender h5 matrices
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abBoxPlot() - abundance boxplot plot
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abVolPlot() - abundance volcano plot
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abundanceTbl() - wrapper function to calculate absolute and relative abundance
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avgExp() - wrapper function for Seurats AverageExpression
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clustifyFun() - clustifyr UMAP heatmap wrap
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compStat() - significance for boxplot
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dotPlot() - nice Seurat dot plot
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dotplotPropeller() - plot propeller results in a barplot
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enrichrRun() - enrichment analysis
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fPlot() - Seurat feature plot
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fPlotCustom() - Seurat feature plot
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findMarkersPresto() - wrapper function for presto find markers
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lss() - list objects from the environment in a pretty way
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pHeatmap() - nice pheatmap
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pcaSeurat() - plot PCA of cluster abundances
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plotEnrichr() - enrichr plot
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plotPropeller() - plot propeller results
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plotSlingshot() - plot slingshot results
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propellerCalc() - propellerCalc
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scale_mat() - scale matrix from pheatmap only internal use
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scale_rows() - scale rows from pheatmap only internal use
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stackedPlot() - abundance stacked bar plot
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theme_rect() - nice ggplot theme